Genome Contact Map Explorer - gcMapExplorer
stable
  • Requirements and Installation
  • How to use gcMapExplorer?
  • Genome Contact Map Browser
  • About gcmap file
  • About ccmap and npbin files
  • About Genomic track h5 file
  • Normalization of Hi-C maps
  • Download example datasets
  • Summary of Python Modules
  • Examples using Python Modules
  • Python Modules documentation
    • ccmap module
    • ccmapHelpers module
    • KnightRuizNorm class
    • gcmap module
    • importer module
    • normalizer module
    • cmstats module
    • genomicsDataHandler module
Genome Contact Map Explorer - gcMapExplorer
  • Docs »
  • Documentation of Python Modules
  • Edit on GitHub

Documentation of Python ModulesΒΆ

  • ccmap module
    • ccmap.CCMAP class
    • ccmap module
  • ccmapHelpers module
    • gcMapExplorer.ccmapHelpers
    • MemoryMappedArray class
  • KnightRuizNorm class
  • gcmap module
    • GCMAP class
    • gcMapExplorer.gcmap
  • importer module
    • CooMatrixHandler class
    • PairCooMatrixHandler class
    • HomerInputHandler class
    • BinsNContactFilesHandler class
    • Other functions of importer module
  • normalizer module
  • cmstats module
  • genomicsDataHandler module
    • List of class
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© Copyright 2016-2017, Rajendra Kumar, Ludvig Lizana, Per Stenberg. Revision 313ade5f.

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