Genome Contact Map Explorer - gcMapExplorer
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Requirements and Installation
How to use gcMapExplorer?
Genome Contact Map Browser
About file formats
Normalization of Hi-C maps
Frequently asked questions
Download example datasets
Summary of Python Modules
Examples using Python Modules
Python Modules documentation
ccmap module
ccmapHelpers module
KnightRuizNorm class
util module
gcmap module
importer module
normalizer module
cmstats module
statDist module
corrMatrix module
genomicsDataHandler module
config module
Genome Contact Map Explorer - gcMapExplorer
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Documentation of Python Modules
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Documentation of Python Modules
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ccmap module
ccmap.CCMAP class
ccmap module
ccmapHelpers module
gcMapExplorer.ccmapHelpers
MemoryMappedArray class
KnightRuizNorm class
util module
Exception classes
Small utility functions
gcmap module
GCMAP class
gcMapExplorer.gcmap
importer module
CooMatrixHandler class
PairCooMatrixHandler class
HomerInputHandler class
BinsNContactFilesHandler class
Other functions of importer module
normalizer module
cmstats module
statDist module
Example
Summary
Documentation
corrMatrix module
genomicsDataHandler module
List of class
config module
Configuration file structure
Examples
Summary
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